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Here's some more progress on my Molecular editor/viewer thingy for work. I'm working on a tool to focus on and highlight only certain parts of the molecule.

Here you can see a Phenylalanine residue up close and personal!

The GUI and 3D rendering is all based on the Kludge library (BSD license!).

github.com/cuchaz/kludge

Everything is written in and integrates for the rendering and for the GUI.

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